Selected research and computational-modeling projects. Code for most lives on my GitHub.
Flux Balance Analysis & Reductive Stress
Coupling flux balance analysis with reaction–diffusion PDEs to model oxygen-driven reductive stress in P. aeruginosa biofilms.
Schistosomiasis Transmission
ODE and PDE (reaction–diffusion, chemotaxis) models of schistosomiasis transmission, including 2D spatial simulation.
Chronic Kidney Disease
Predictive modeling of CKD progression from longitudinal eGFR data (presented at SIAM MPI).
Complex Systems
SVEIR epidemic models, Vicsek swarm dynamics, and stochastic cellular automata.
Bayesian Inference
Bayesian hierarchical modeling and MCMC for uncertainty quantification in experimental data.
Scientific Computing
Finite-difference PDE solvers, traffic modeling, image processing, and dynamical-systems analysis.